Report for Sequence Feature Glyma15g33980
Feature Type: gene_model
Chromosome: Gm15
Start: 37991133
stop: 38001231
Source: JGI
Version: Wm82.a1.v1.1
High confidence: yes
A newer version of this gene model can be found here:
Annotations for Glyma15g33980
Database ID Annotation Type Annotation Description Annotation Source Match Score Evidence Code
AT5G58040 AT
Annotation by Michelle Graham. TAIR10: homolog of yeast FIP1 [V] | chr5:23488865-23494000 FORWARD LENGTH=1196
SoyBase E_val: 3.00E-118 ISS
GO:0006397 GO-bp
Annotation by Michelle Graham. GO Biological Process: mRNA processing
SoyBase N/A ISS
GO:0008150 GO-bp
Annotation by Michelle Graham. GO Biological Process: biological process
SoyBase N/A ISS
GO:0008284 GO-bp
Annotation by Michelle Graham. GO Biological Process: positive regulation of cell proliferation
SoyBase N/A ISS
GO:0009630 GO-bp
Annotation by Michelle Graham. GO Biological Process: gravitropism
SoyBase N/A ISS
GO:0005634 GO-cc
Annotation by Michelle Graham. GO Cellular Compartment: nucleus
SoyBase N/A ISS
GO:0003723 GO-mf
Annotation by Michelle Graham. GO Molecular Function: RNA binding
SoyBase N/A ISS
GO:0005515 GO-mf
Annotation by Michelle Graham. GO Molecular Function: protein binding
SoyBase N/A ISS
PF05182 PFAM
Fip1 motif
JGI ISS
UniRef100_B9SBX9 UniRef
Annotation by Michelle Graham. Most informative UniRef hit: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO
SoyBase E_val: 0 ISS
UniRef100_UPI000233B729 UniRef
Annotation by Michelle Graham. Best UniRef hit: UPI000233B729 related cluster n=1 Tax=unknown RepID=UPI000233B729
SoyBase E_val: 0 ISS
Expression Patterns of Glyma15g33980
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Gene model name correspondences to Glyma15g33980 Gene Call Version Wm82.a1.v1.1
Corresponding Name Annotation Version Evidence Comments
Glyma.15g205600 Wm82.a2.v1 IGC As supplied by JGI
References for Glyma15g33980
Coding sequences of Glyma15g33980
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma15g33980.2 sequence type=CDS gene model=Glyma15g33980 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
ATGGAAGACGACGACGAGTTCGGAGATTTATACACCGACGTTCTCCGCCCCTTCGCTTCTTCGCCCTCATTATCCTCTGCGCCGCAGCCCCACCAACCTTCCCCTGCGCCCCCCTCCCTCGATCTCAGTCCCAATCCGGACGATGCACAGATCCCCTGCGATGCGCCCCACGCTAATTCCCCTGCACCAACCAATCCCCTCCCTGAGCCAGACCCACGCGAAGCGCCCACGGAGCCGCCTAAAATTCCGGACGCCAAGCCTACGACGGATTCAAACCTCGCCGCCGCCGCCGTTGCCGTTGATCCGATGGACAGGGAGGTGAAATTCGACATCGAGGAGGACGAAGAAGACGGCGGAGAGCCGGTTATTCCGGGGCTTACAGGCGAGTTGGCAGCGCCGACTGAGGGCGAGGGCGATGATTGGGACAGCGATAGTGAGGATGATTTGAAGATAGTGTTGAATGAGAACAACCACATGGCCATGGAAAGAGGAGGGATGGCGGATGGTGATGAGGAGGAGGAGGATGGGGATGAGGAGCTTGTGATTGTGGCTGGCGGCGATCCGAATCAGGGCGCGGAGGAGCCGGAGTGGGGCGAGAATGCCACCCTGGCCGCTGGAGACGGCGAGAGGAAGGATGCCGCCGGGGAGTTGGCCAAGGCCGGCGGTGCGGCTGTGCCCCCGAAGATTGGGTATAGCAATCAAGGATATCACCCCTTTCATTCGCCTTTTAAGTATCAGTATGTTAGGCCTGGTGCAGCACTAATGCCTGGAGCTGCTGCTTCTGCTCCAGGAGGGCCTCCTGGTCAGATTCGTCCTCTTGCTAACATGGCTGGTCGAGGCAGAGGGGACTGGAGACCGCCTGGAATAAAAGGTGGTGCTGCTATGCAAAAAGGTTTTCATGCAGGTCCCGGATTACCTGGTTGGGGCAACGGTGCAGCAGGGCGGGGTTTTGGTGGTGGATTGGAATTCACACTTCCTTCTCACAAGACTATATTTGATGTAGATATTGAGAATTTTGAGGAGAAACCGTGGCAATATCCAAATATTGATACATCAGATTTTTTCAACTTTGGCCTGAATGAGGAGAGCTGGAAAGATTATTGCAAACAGCTGGAGCAACTACGCTTGGAGTCTACAATGCAAAGCAAGATCCGTGTTTATGAGAGTGGTCGAACAGAGCAGGAGTATGATCCAGACTTACCCCCTGAATTAGCTGCAGCTACTGGTATACATGATAGTCCCGTGGAAAACACAAATTCTCTAAAGTCAGATGTCGGACAAAGCGATGTTATGAAAGGTTCTGGGACTGGACGTGTGCGACCACCACTACCAACTGGTAGAGCAATACAGGTGGAAGGTGGTTATGGTGACCGGCTTCCCTCCATTGATACCCGCCCTCCCCGAATCCGCGATTCCGATGCTATCATTGAGATTGTTTTACAGGATACAGAAGATGACCAGTCCTCTGCAGGAGTTGCTCAAGATCCGCCAGAGGGTGGAGAACCCCATAGAGAGGATTTTAGAGAAGACCATGTAGCTGGAGATGAAATTCCAAGGTTGGAACCCGAGTATTTTGATGGTTTTCCACAGGTTTATAATGGTCGGAAGAAAGAGATTGCAGGAAGAAGAATGTCATTTATAAATTCCAGTGCTGCTAACATGCCTAATGGGGATGAAAAATTGTTCTTCCCACAGGAAGAGCCGATTGAGTACTCTGGTTCAAAGGGCCAAAATCGTAGGTCCTATGGTGGCAATTGTAGCTCCTCTCATGACGAAAGGCAGATGCAAAGAAGAGTGGGTGGTCAGTCTCCTTCAATTACTCCCATTCAAGAATTGGCAACTGATAACAGTCTAAAAGAAGAGTCAGCAGAAAGCATGGAAGGTAGACATAGATCATCCCCTGCTGTTAAGGATATAAGGGAGTCCAGTGTGGAGGAGAAGGATATTGAACTTGAGGATACTGGGACAGCTGATGGAAGTTCCAGATTGGAAAAGGAGGAAACAGTAGACAAAGTAGATGCCCTTGAGGATGGGGTAGCAAAGAGACAGAAGTTGACATCTCGAGTTGAGCCACCTTTGCTTGATGAAGTTGATGATTGGGAGGACTCAAAAGCTGCAAAAAGTAGTGATAACAGCAAAGCAAGATCAGCCAGCAGTAGGGATAACCAAAAGCGGCGAGAGGGTTTTGAAGAGGAAGTAGTTCAAGATCCACGATCAGCACAACTGAGTAGCATCAGACAGCACCCGGATGAAATTGAGCAGGGATTTTATAGAAGAGAGCATGATGCAAAGCAAGAACCCGGAAGAAATCTCATGATGCTTAAAGGCAGAGAGAGACCATACCCTTACAAGGACCGGCATCCTAGCTCAGCTACTCAGTTGAACACAAATGCTGATGGATTTGATGGACAAAAAGAAAGGGACAATTCTGAAATGGATTGGTCACGAAGAGATGATGATCTCTATAACAGAAGGGTTAGAAATGATGAACCTAGAAAGAGGGATAGGGCTAAGGTTCGAGAAAATGAGAAAAACGACAAAGAAGATAGCCTTCATTCAAGAAAACAGTTGGATAATGGTAGCTACAGGGTTTCCTATGAAAAGGATGTTGGGTCTAGAGACTCAAGACAAAGGGAAAGAGATGAGGGCTTGAGGATTAGGTACGAAGCAGTAGAGGATTACCGTGGCAAGAAGAGGAAGGATGAGGAATATCTTAGGAGGGAGCATATTGACAAAGAAGAAGTTCTGCATGGCTACAGGGAAATTGCTAGTAGTCGGCGCAGACGAGAAAGAGATGAAGTATTGGATCCACGAAAGAGGGATGACCTGCAAAGAGCTAGAGATAACCCTGATGATCAATATGCTACTAGGCAGAAAGATGAGGCCTGGGTACTGAAGGAGAGGGGTGATAGGCAGAGAGATAGGGAAGAGTGGTGCCGGATGAAACAGTCCCATGAAGAACACCTACCCAAGCGTGAAAGAGAAGGACGGAGTTCTGTAAGAAGTGGACGAGGGGCTGAACATAAACTTTCTGAGAAAGAATACCAATCCCGAGAAGCAATGCGACACAATGACCAATTGAAGAGAAGGGATCGAATTCAGGATGAAAGTCCACATCATAAGGGGCGAGATGATGCTTCTGCCCGTGGAAATCAATATACTACTGAGGAAAGGCGATCTAGGCTAGAAAGGTCAAGTAGTCGTAGTGATCGTGTTGCTAATGTTTCTGATAACCAAAAAGTCAAGCATAGAGAAGGCTCAAGGAAAAGCAAAGAACGTGATGTTAGTGACCTTAATAGTTTAGGCCTGTCCAAGAGAAGTCAAGAAAATCAAAGTGGTCCAACCAATGAGAAGGGCTTGAAAGGATCTGGTGATGAAGAGCGTGCTGAGCATGAAATTTCAGGGCATCGCCTGTCAAGAAAACAGCGGGAAGACATGTCTTCAGATGATGAACAGCAAGATTCTCGCAGAGGACGTTCTAAATTGGAACGCTGGACCAGCCATAAGGAAAGAGATTTCAATGTCAACAAGTCCTCTTCTTCCTTGAAGTTCAAAGACATTGATAAGGATAATAATGATGCTTCTTCTGAAGCTGGGAAGCCTGCGTATGAACCTGCTAAAACTGTTGATGCTGATAACCAACATATCTTGTCAGTTGAAGCAAGGGATTCTGCAGATATGGAAAATAGGGATGCTGATACAAAAGAATCAGGGGATCGGCACCTTGACACAGTTGAGAGGTTGAAGAAGCGAAGTGAGCGGTTCAAGCTCCCAATGCCTAGTGAAAAAGAGGCCCTCGTCATCAAGAAGTTAGAAAGTGAACCTCTGCCTTCTGCCAAAAGTGAAAATCCAGTAGTAGATTCAGAAGTCAAACAAGAACGACCTGCCCGGAAAAGAAGATGGGTTACTAACTGA
Predicted protein sequences of Glyma15g33980
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma15g33980.2 sequence type=predicted peptide gene model=Glyma15g33980 sequence assembly version=Glyma 1.0 annotation version=1.1 JGI Gene Call confidence=high
MEDDDEFGDLYTDVLRPFASSPSLSSAPQPHQPSPAPPSLDLSPNPDDAQIPCDAPHANSPAPTNPLPEPDPREAPTEPPKIPDAKPTTDSNLAAAAVAVDPMDREVKFDIEEDEEDGGEPVIPGLTGELAAPTEGEGDDWDSDSEDDLKIVLNENNHMAMERGGMADGDEEEEDGDEELVIVAGGDPNQGAEEPEWGENATLAAGDGERKDAAGELAKAGGAAVPPKIGYSNQGYHPFHSPFKYQYVRPGAALMPGAAASAPGGPPGQIRPLANMAGRGRGDWRPPGIKGGAAMQKGFHAGPGLPGWGNGAAGRGFGGGLEFTLPSHKTIFDVDIENFEEKPWQYPNIDTSDFFNFGLNEESWKDYCKQLEQLRLESTMQSKIRVYESGRTEQEYDPDLPPELAAATGIHDSPVENTNSLKSDVGQSDVMKGSGTGRVRPPLPTGRAIQVEGGYGDRLPSIDTRPPRIRDSDAIIEIVLQDTEDDQSSAGVAQDPPEGGEPHREDFREDHVAGDEIPRLEPEYFDGFPQVYNGRKKEIAGRRMSFINSSAANMPNGDEKLFFPQEEPIEYSGSKGQNRRSYGGNCSSSHDERQMQRRVGGQSPSITPIQELATDNSLKEESAESMEGRHRSSPAVKDIRESSVEEKDIELEDTGTADGSSRLEKEETVDKVDALEDGVAKRQKLTSRVEPPLLDEVDDWEDSKAAKSSDNSKARSASSRDNQKRREGFEEEVVQDPRSAQLSSIRQHPDEIEQGFYRREHDAKQEPGRNLMMLKGRERPYPYKDRHPSSATQLNTNADGFDGQKERDNSEMDWSRRDDDLYNRRVRNDEPRKRDRAKVRENEKNDKEDSLHSRKQLDNGSYRVSYEKDVGSRDSRQRERDEGLRIRYEAVEDYRGKKRKDEEYLRREHIDKEEVLHGYREIASSRRRRERDEVLDPRKRDDLQRARDNPDDQYATRQKDEAWVLKERGDRQRDREEWCRMKQSHEEHLPKREREGRSSVRSGRGAEHKLSEKEYQSREAMRHNDQLKRRDRIQDESPHHKGRDDASARGNQYTTEERRSRLERSSSRSDRVANVSDNQKVKHREGSRKSKERDVSDLNSLGLSKRSQENQSGPTNEKGLKGSGDEERAEHEISGHRLSRKQREDMSSDDEQQDSRRGRSKLERWTSHKERDFNVNKSSSSLKFKDIDKDNNDASSEAGKPAYEPAKTVDADNQHILSVEARDSADMENRDADTKESGDRHLDTVERLKKRSERFKLPMPSEKEALVIKKLESEPLPSAKSENPVVDSEVKQERPARKRRWVTN*